|
||||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use fern.simulation | |
---|---|
fern.benchmark | Provides classes for benchmarking simulations (time benchmarks, histogram distance calculation). |
fern.cellDesigner | |
fern.cellDesigner.ui | |
fern.cytoscape | Provides the classes for the cytoscape plugin. |
fern.example | Contains examples and demonstrations of the framework. |
fern.network | Provides general classes and interfaces for storing network data. |
fern.network.sbml | Provides the classes for parsing and using sbml based networks. |
fern.simulation | Provides algorithms for simulating reaction network as well as methods for observer certain aspects of a simulation. |
fern.simulation.algorithm | Provides algorithms for stochastic simultion of reaction networks. |
fern.simulation.controller | Provides classes to control the simulations. |
fern.simulation.observer | Provides classes to observe certain aspects of simulations. |
Classes in fern.simulation used by fern.benchmark | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.cellDesigner | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.cellDesigner.ui | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.cytoscape | |
---|---|
Simulator
Base class for stochastic simulators. |
|
Simulator.FireType
Defines different types of a firing for reactions. |
Classes in fern.simulation used by fern.example | |
---|---|
Simulator
Base class for stochastic simulators. |
|
Simulator.FireType
Defines different types of a firing for reactions. |
Classes in fern.simulation used by fern.network | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.network.sbml | |
---|---|
Simulator
Base class for stochastic simulators. |
|
Simulator.FireType
Defines different types of a firing for reactions. |
Classes in fern.simulation used by fern.simulation | |
---|---|
Simulator.FireType
Defines different types of a firing for reactions. |
Classes in fern.simulation used by fern.simulation.algorithm | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.simulation.controller | |
---|---|
Simulator
Base class for stochastic simulators. |
Classes in fern.simulation used by fern.simulation.observer | |
---|---|
Simulator
Base class for stochastic simulators. |
|
Simulator.FireType
Defines different types of a firing for reactions. |
|
||||||||||
PREV NEXT | FRAMES NO FRAMES |