Uses of Class
fern.simulation.algorithm.GillespieEnhanced

Packages that use GillespieEnhanced
fern.simulation.algorithm Provides algorithms for stochastic simultion of reaction networks. 
 

Uses of GillespieEnhanced in fern.simulation.algorithm
 

Subclasses of GillespieEnhanced in fern.simulation.algorithm
 class AbstractBaseTauLeaping
          Base class for all tau leaping procedures (which are different in the methods choosing the timestep candidates for critical and noncritical reactions).
 class AbstractTauLeapingPropensityBoundSimulator
          There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition.
 class CompositionRejection
          This is an enhanced version of the original Direct method developed by Gillespie.
 class TauLeapingAbsoluteBoundSimulator
          There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition.
 class TauLeapingRelativeBoundSimulator
          There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition.
 class TauLeapingSpeciesPopulationBoundSimulator
          There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition.