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Packages that use GillespieEnhanced | |
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fern.simulation.algorithm | Provides algorithms for stochastic simultion of reaction networks. |
Uses of GillespieEnhanced in fern.simulation.algorithm |
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Subclasses of GillespieEnhanced in fern.simulation.algorithm | |
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class |
AbstractBaseTauLeaping
Base class for all tau leaping procedures (which are different in the methods choosing the timestep candidates for critical and noncritical reactions). |
class |
AbstractTauLeapingPropensityBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition. |
class |
CompositionRejection
This is an enhanced version of the original Direct method developed by Gillespie. |
class |
TauLeapingAbsoluteBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition. |
class |
TauLeapingRelativeBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition. |
class |
TauLeapingSpeciesPopulationBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon in order to fulfill the leap condition. |
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