Uses of Class
halo.data.Mapping

Packages that use Mapping
halo.data Provides for the extraction, filtering, handling and saving of expression data. 
halo.halflife Provides for the calculation and handling of half-lives. 
halo.userinterface.gui Provides for the generation and handling of a graphical user interface, as well as the starting of corresponding calculations according to user input. 
 

Uses of Mapping in halo.data
 

Methods in halo.data that return Mapping
 Mapping<java.lang.String,java.lang.Integer> Data.calculateNewMapping()
          Calculates the Mapping corresponding to the ratio.
 Mapping<java.lang.String,java.lang.Integer> Data.copyMap()
          Copies the content of the Mapping object.
 Mapping<java.lang.String,java.lang.Integer> Data.getMap()
          Returns the map corresponding to the data.
 

Methods in halo.data that return types with arguments of type Mapping
 java.util.ArrayList<Mapping<java.lang.String,java.lang.String>> Data.getAttributes()
          Returns the attribute lists.
 

Methods in halo.data with parameters of type Mapping
 void Data.setMap(Mapping<java.lang.String,java.lang.Integer> map)
          Sets the mapping corresponding to the whole data and filtered values.
 

Method parameters in halo.data with type arguments of type Mapping
 void Data.setAttributes(java.util.ArrayList<Mapping<java.lang.String,java.lang.String>> attributes)
          Sets the attributes list for the data.
 

Constructors in halo.data with parameters of type Mapping
Data(double[][] totalRNA, double[][] newRNA, double[][] preRNA, java.lang.String[] totalDescr, java.lang.String[] newDescr, java.lang.String[] preDescr, Mapping<java.lang.String,java.lang.Integer> map)
          Constructs a Data-Object based on already existing data.
 

Uses of Mapping in halo.halflife
 

Methods in halo.halflife that return Mapping
 Mapping<java.lang.String,java.lang.Integer> HalfLife.getNewMapping()
          Returns the mapping corresponding to ratios/half-lives
 

Methods in halo.halflife with parameters of type Mapping
 void HalfLife.setNewMap(Mapping<java.lang.String,java.lang.Integer> newMap)
          Sets the mapping corresponding to the ratio values
 

Uses of Mapping in halo.userinterface.gui
 

Methods in halo.userinterface.gui that return types with arguments of type Mapping
 java.util.ArrayList<Mapping<java.lang.String,java.lang.String>> GuiFilterData.getAttributesList()
          Returns the list of attributes for the data
 

Method parameters in halo.userinterface.gui with type arguments of type Mapping
 void GuiFilterData.addAttributesList(java.util.ArrayList<Mapping<java.lang.String,java.lang.String>> list, java.lang.String[] attrDescr)
          Adds a list of attributes to the data, as well as the corresponding descriptors