Packages
halo.data Provides for the extraction, filtering, handling and saving of expression data.
halo.data.biascorrection Provides for the correction of bias in the expression data.
halo.data.dataExceptions Provides exceptions for incorrect data file format Related Documentation For overviews, tutorials, examples, guides, and tool documentation, please see: HALO documentation
halo.examples Provides easy-to-understand examples for the usage of HALO.
halo.halflife Provides for the calculation and handling of half-lives.
halo.halflife.alpha Provides for the calculation of alpha functions.
halo.normalization Provides for the calculation and handling of normalization.
halo.tools Provides a set of tools applicable for several uses.
halo.userinterface.cmdline Provides for the handling of user input and starting of corresponding calculations.
halo.userinterface.cmdline.cmdexceptions Provides exceptions for incorrect user input.
halo.userinterface.gui Provides for the generation and handling of a graphical user interface, as well as the starting of corresponding calculations according to user input.
halo.userinterface.gui.graphhandler Provides for generation of plots and histograms.
halo.userinterface.gui.guitools Provides a set of tools corresponding to the graphical user interface.
halo.userinterface.gui.session Provides for the handling, saving and loading of sessions and configuration information.