Serialized Form
Package halo.data.dataExceptions |
serialVersionUID: 1967991737081990623L
Package halo.userinterface.cmdline.cmdexceptions |
serialVersionUID: 1194462908251849445L
flag
java.lang.String flag
serialVersionUID: 1769333775967410986L
serialVersionUID: 3931226977233536492L
flag
java.lang.String flag
Package halo.userinterface.gui |
serialVersionUID: 5557850785265038922L
session
Session session
sessName
java.io.File sessName
outputData
java.io.File outputData
outputHL
java.io.File outputHL
pqs
java.io.File pqs
input
java.io.File input
menuLoadSess
javax.swing.JMenuItem menuLoadSess
menuSaveSess
javax.swing.JMenuItem menuSaveSess
menuClearSess
javax.swing.JMenuItem menuClearSess
menuExit
javax.swing.JMenuItem menuExit
menuSaveData
javax.swing.JMenuItem menuSaveData
menuSaveHL
javax.swing.JMenuItem menuSaveHL
menuBias
javax.swing.JMenuItem menuBias
menuSaveR
javax.swing.JMenuItem menuSaveR
menuSaveB
javax.swing.JMenuItem menuSaveB
menuEva
javax.swing.JMenuItem menuEva
menuCalcMed
javax.swing.JMenuItem menuCalcMed
menuMed
javax.swing.JMenuItem menuMed
menuHelpH
javax.swing.JMenuItem menuHelpH
menuHelpAbout
javax.swing.JMenuItem menuHelpAbout
menuHelpWeb
javax.swing.JMenuItem menuHelpWeb
menuSettGene
javax.swing.JMenuItem menuSettGene
menuSettAlpha
javax.swing.JMenuItem menuSettAlpha
menuSettTime
javax.swing.JMenuItem menuSettTime
menuSettR
javax.swing.JMenuItem menuSettR
menuSettMax
javax.swing.JMenuItem menuSettMax
menuSettRep
javax.swing.JMenuItem menuSettRep
menuHelpReplicate
javax.swing.JMenuItem menuHelpReplicate
menuPQS
javax.swing.JMenuItem menuPQS
menuSaveHLA
javax.swing.JMenuItem menuSaveHLA
menuSubSave
javax.swing.JMenuItem menuSubSave
menuNorm
javax.swing.JMenuItem menuNorm
menuCalcHL
javax.swing.JMenuItem menuCalcHL
menuFilter
javax.swing.JMenu menuFilter
menuNormal
javax.swing.JMenu menuNormal
menuHalfLife
javax.swing.JMenu menuHalfLife
methThresh
javax.swing.JRadioButton methThresh
methAbs
javax.swing.JRadioButton methAbs
methPQS
javax.swing.JRadioButton methPQS
methPQSMin
javax.swing.JRadioButton methPQSMin
none
javax.swing.JRadioButton none
dataPa
javax.swing.JPanel dataPa
filtPa
javax.swing.JPanel filtPa
normPa
javax.swing.JPanel normPa
hlPa
javax.swing.JPanel hlPa
corrPa
javax.swing.JPanel corrPa
panel
javax.swing.JPanel panel
sep1
javax.swing.JSeparator sep1
sep2
javax.swing.JSeparator sep2
sep3
javax.swing.JSeparator sep3
filepath
javax.swing.JTextField filepath
chooser
javax.swing.JFileChooser chooser
calc
javax.swing.JButton calc
plotNorm
javax.swing.JButton plotNorm
plotHalf
javax.swing.JButton plotHalf
startHLButton
javax.swing.JButton startHLButton
saveHLs
javax.swing.JButton saveHLs
add
javax.swing.JButton add
c
java.awt.GridBagConstraints c
columnsTotal
java.util.List<E> columnsTotal
columnsNew
java.util.List<E> columnsNew
columnsPre
java.util.List<E> columnsPre
columnsTotalOut
java.util.List<E> columnsTotalOut
columnsNewOut
java.util.List<E> columnsNewOut
columnsPreOut
java.util.List<E> columnsPreOut
attributesOut
java.util.List<E> attributesOut
absenceLabel
java.util.List<E> absenceLabel
attributeFiles
java.util.List<E> attributeFiles
orgLabelsCalls
java.util.List<E> orgLabelsCalls
orgLabelsOther
java.util.List<E> orgLabelsOther
attributeFileLabels
java.util.ArrayList<E> attributeFileLabels
replicates
java.util.List<E> replicates
labels
java.util.ArrayList<E> labels
temporary
java.util.ArrayList<E> temporary
attributesOrg
java.util.ArrayList<E> attributesOrg
attributeLabels
java.util.ArrayList<E> attributeLabels
attributes
java.util.ArrayList<E> attributes
medCorr
java.util.List<E> medCorr
normGraphConstructor
XYGraphConstructor normGraphConstructor
cor
RCorrelationCoefficient cor
loess
RLoessRegression loess
display
java.lang.StringBuffer display
pathR
java.lang.String pathR
spotid
java.lang.String spotid
normMethod
java.lang.String normMethod
uraMeth
java.lang.String uraMeth
method
java.lang.String method
ratioMethod
int ratioMethod
replicate
int replicate
column
int column
startDisplay
int startDisplay
which
int which
tempIndex
int tempIndex
renormalize
boolean renormalize
unequal
boolean unequal
cancel
boolean cancel
corrExpanded
boolean corrExpanded
plotQuality
boolean plotQuality
labelingTime
double labelingTime
medTime
double medTime
median
double median
guiData
GuiFilterData guiData
guiNorm
GuiNormal guiNorm
guiHL
GuiHalfLife guiHL
dataObj
Data dataObj
eval
Normalization eval
alpha
Alpha alpha
Package halo.userinterface.gui.guitools |
serialVersionUID: -8007797170913184546L
owner
java.awt.Frame owner
serialVersionUID: -2533991156073064622L
serialVersionUID: 4339266350540945367L
panel
javax.swing.JPanel panel
field
javax.swing.JTextField field
cancel
boolean cancel
width
int width
height
int height
serialVersionUID: -3181668702954972979L
list
java.util.ArrayList<E> list
panel
javax.swing.JPanel panel
cancel
boolean cancel