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halo.data | Provides for the extraction, filtering, handling and saving of expression data. |
halo.data.biascorrection | Provides for the correction of bias in the expression data. |
halo.data.dataExceptions | Provides exceptions for incorrect data file format Related Documentation For overviews, tutorials, examples, guides, and tool documentation, please see: HALO documentation |
halo.examples | Provides easy-to-understand examples for the usage of HALO. |
halo.halflife | Provides for the calculation and handling of half-lives. |
halo.halflife.alpha | Provides for the calculation of alpha functions. |
halo.normalization | Provides for the calculation and handling of normalization. |
halo.tools | Provides a set of tools applicable for several uses. |
halo.userinterface.cmdline | Provides for the handling of user input and starting of corresponding calculations. |
halo.userinterface.cmdline.cmdexceptions | Provides exceptions for incorrect user input. |
halo.userinterface.gui | Provides for the generation and handling of a graphical user interface, as well as the starting of corresponding calculations according to user input. |
halo.userinterface.gui.graphhandler | Provides for generation of plots and histograms. |
halo.userinterface.gui.guitools | Provides a set of tools corresponding to the graphical user interface. |
halo.userinterface.gui.session | Provides for the handling, saving and loading of sessions and configuration information. |
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