Uses of Package
halo.data

Packages that use halo.data
halo.data Provides for the extraction, filtering, handling and saving of expression data. 
halo.examples Provides easy-to-understand examples for the usage of HALO. 
halo.halflife Provides for the calculation and handling of half-lives. 
halo.normalization Provides for the calculation and handling of normalization. 
halo.tools Provides a set of tools applicable for several uses. 
halo.userinterface.cmdline Provides for the handling of user input and starting of corresponding calculations. 
halo.userinterface.gui Provides for the generation and handling of a graphical user interface, as well as the starting of corresponding calculations according to user input. 
halo.userinterface.gui.graphhandler Provides for generation of plots and histograms. 
halo.userinterface.gui.session Provides for the handling, saving and loading of sessions and configuration information. 
 

Classes in halo.data used by halo.data
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
Mapping
          Mapping of spotIDs to corresponding indices of RNA sets
 

Classes in halo.data used by halo.examples
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
 

Classes in halo.data used by halo.halflife
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
Mapping
          Mapping of spotIDs to corresponding indices of RNA sets
 

Classes in halo.data used by halo.normalization
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
 

Classes in halo.data used by halo.tools
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
 

Classes in halo.data used by halo.userinterface.cmdline
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
 

Classes in halo.data used by halo.userinterface.gui
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
Mapping
          Mapping of spotIDs to corresponding indices of RNA sets
 

Classes in halo.data used by halo.userinterface.gui.graphhandler
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.
 

Classes in halo.data used by halo.userinterface.gui.session
Data
          Reading and containing RNA values from an input file and providing methods for the calculation of RNA ratios as well as methods to save the filtered values to a file.