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main(String[])
- Static method in class halo.examples.
SampleUseCase1
main(String[])
- Static method in class halo.examples.
SampleUseCase2
main(String[])
- Static method in class halo.examples.
SampleUseCase3
main(String[])
- Static method in class halo.userinterface.cmdline.
CmdFilterData
Main method which calls all necessary methods to get from a given options array to a finished output file
main(String[])
- Static method in class halo.userinterface.cmdline.
CmdHalfLife
Main method which takes an options array as input and starts all necessary calculations for half-lives Prints the results into a file, if '-corr TRUE' also provides correction factors based on median
main(String[])
- Static method in class halo.userinterface.cmdline.
CmdNormalization
Contains all necessary methods to calculate normalization from an options array
main(String[])
- Static method in class halo.userinterface.cmdline.
CommandLine
Main method which is called upon starting the command line input
main(String[])
- Static method in class halo.userinterface.gui.
Gui
Starting the application
main(String[])
- Static method in class halo.userinterface.gui.guitools.
AboutDialog
Mapping
<
T
,
U
> - Class in
halo.data
Mapping of spotIDs to corresponding indices of RNA sets
Mapping()
- Constructor for class halo.data.
Mapping
Constructor to initialize the Mapping
mapSize()
- Method in class halo.data.
Mapping
Returns the size of the Mapping (=number of entries)
median(Data, ArrayList<HalfLife>, double)
- Static method in class halo.examples.
SampleUseCase2
Calculates the median half-life for a set of methods and a given time
median(double[])
- Static method in class halo.halflife.
HalfLife
Calculation of the median of a single dimensional array
MEDIAN
- Static variable in class halo.userinterface.gui.
GuiNormal
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