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Filter
- Class in
halo.data
Provides methods for filtering the values contained in a Data object
Filter()
- Constructor for class halo.data.
Filter
filter(Data, double)
- Static method in class halo.data.
Filter
removes all experiments where at least one of the values is beneath a certain threshold Commandline option -f threshold='value'
filterAbsent(Data, ArrayList<String>, String, int)
- Static method in class halo.data.
Filter
Removes values that are defined as 'absent' in the attribute list Commandline option -f present='label1,label2,...
filterCorrectionBias(Data, HashMap<String, Double>)
- Static method in class halo.data.
Filter
Filters the data according to given values for bias correction in such a way that only those probeset ids are kept that have corresponding correction values
filterPQS(Data, Normalization, double, boolean)
- Static method in class halo.data.
Filter
Please note that this method can only be used after normalization!
filterPQS(Data, Normalization, int, boolean)
- Static method in class halo.data.
Filter
Please note that this method can only be used after normalization!
filterPQS(Data, Normalization, boolean)
- Static method in class halo.data.
Filter
Please note that this method can only be used after normalization!
findMiniMaxi()
- Method in class halo.data.
Data
Sets the new minimum and maximum
formatList(String[])
- Static method in class halo.userinterface.cmdline.
CommandLine
Allows to print a String[] into a human readable format
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