################HALO version 1.3#################
x:233
y:2
max:false
datafile:http://www.bio.ifi.lmu.de/files/Software/halo/data/Example_mouse.txt
columnsNew:E1,E2,E3
columnsPre:U1,U2,U3
columnsTotal:T1,T2,T3
labels:Column 1,Gene Title,Gene Symbol,Entrez Gene,RefSeq Transcript ID,T1,T2,T3,E1,E2,E3,U1,U2,U3,Call_T1,Call_T2,Call_T3,Call_E1,Call_E2,Call_E3,Call_U1,Call_U2,Call_U3
ratioMethod:1
normMethod:standard
hlMethods:new
times:55.0
replicates:-1
display:new, 55.0, -1 # 
dataMethods:present=Call_T1;Call_T2;Call_T3;Call_E1;Call_E2;Call_E3;Call_U1;Call_U2;Call_U3|A|1,present=Call_T1;Call_T2;Call_T3;Call_E1;Call_E3;Call_E2;Call_U1;Call_U2;Call_U3|M|1,present=Gene Symbol|---|1
checkFilt:true
checkAbs:false
checkHL:true
checkNorm:false
checkPQS:false
checkPQSMin:false
checkThresh:false
spotid:Column 1
genelabel:gene_name
alpha:alphaConstant
log:false
plotQuality:false
originalsCalls:Call_T1,Call_T2,Call_T3,Call_E1,Call_E2,Call_U1,Call_E3,Call_U2,Call_U3