Uses of Package
data.networks

Packages that use data.networks
data.complexes   
data.networks   
data.petrinets   
data.purifications   
evaluation.comparison   
evaluation.networkperformance   
methods.clustering   
methods.interologs   
methods.interologs.blast   
methods.scores   
methods.scores.bootstrap   
tools.namemapping   
userinterface.gui   
zplayground   
 

Classes in data.networks used by data.complexes
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by data.networks
CombinationRules
          A set of combination rules defines how the combination of two networks is accomplished.
CombinationRules.CombinationType
          Defines how the nodes of both source networks are combined into a new set of nodes
CombinationRules.WeightMergePolicy
          Defines how the weights of identical edges are combined for the resulting network
NetworkEdge
          Represents one edge in a ProteinNetwork.
NetworkSearchCallback
          This interface must be implemented by classes which function as callback adapter for the network search functions ProteinNetwork.depthFirstSearch(int, NetworkSearchCallback) and ProteinNetwork.breadthFirstSearch(int, NetworkSearchCallback).
ProteinNetwork
          Represents a network of binary protein interactions.
ProteinPair
          A pair of two proteins represented by their internal IDs.
 

Classes in data.networks used by data.petrinets
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by data.purifications
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by evaluation.comparison
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by evaluation.networkperformance
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by methods.clustering
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by methods.interologs
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by methods.interologs.blast
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by methods.scores
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by methods.scores.bootstrap
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by tools.namemapping
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by userinterface.gui
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in data.networks used by zplayground
ProteinNetwork
          Represents a network of binary protein interactions.