clusterer

This tool clusters a given scores network and writes the resulting clustering to the standard output or into a file.

Call the tool without any command line arguments to get detailed information about the parameters for this program.

See also:

Example calls

cmdline.sh clusterer -net data/scores/bootstrap_combined.txt.gz -method mcl -I 2.0 -o mcl.out -nosingle

cmdline.sh clusterer -net data/scores/bootstrap_combined.txt.gz -method hcl -linkage upgma -cutoff 0.2 -o hcl.out -nosingle


ProCope documentation