Uses of Class
methods.scores.bootstrap.BootstrapMCLClusterings

Packages that use BootstrapMCLClusterings
methods.scores.bootstrap   
 

Uses of BootstrapMCLClusterings in methods.scores.bootstrap
 

Methods in methods.scores.bootstrap that return BootstrapMCLClusterings
static BootstrapMCLClusterings Bootstrap.clusterForSample(ProteinNetwork scores, ArrayList<Float> inflationCoefficients)
          Performs MCL clustering of a given scores network with a set of inflation coefficient.
static BootstrapMCLClusterings Bootstrap.clusterForSample(ProteinNetwork scores, Float... inflationCoefficients)
          Performs MCL clustering of a given scores network with a set of inflation coefficient.
 

Method parameters in methods.scores.bootstrap with type arguments of type BootstrapMCLClusterings
static ArrayList<ComplexSet> Bootstrap.extractClusteringsWithOptimalInflation(ArrayList<BootstrapMCLClusterings> clusteringLists, float optimalInflation)
          Extracts clusterings created with a given inflation coefficient (should be the optimal one) from a set of clusterings.
static float Bootstrap.findBestInflation(ArrayList<BootstrapMCLClusterings> clusteringsOnlyEff)
          Finds the best inflation coefficient from a given set of clusterings.