evaluation.comparison
Class NetworkComparison
java.lang.Object
evaluation.comparison.NetworkComparison
public class NetworkComparison
- extends Object
Contains methods for comparing two protein networks
.
This class is not instantiatable.
- Author:
- Jan Krumsiek
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
weightsOverlap
public static List<Point> weightsOverlap(ProteinNetwork scores1,
ProteinNetwork scores2,
boolean excludeZeros)
- Compares the weights of all edges of two networks. Each value pair
in the result set stands for the two weights of the same edge in both
networks. If a edge does not exist in one of the networks, the value
0 will be assumed.
- Parameters:
scores1
- network 1scores2
- network 2excludeZeros
- do not include values where an edge does not exist
in the other network or has a weight of 0
- Returns:
- list of edge weight pairs
- See Also:
CorrelationCoefficient