Uses of Package
procope.data.networks

Packages that use procope.data.networks
procope.data.complexes   
procope.data.networks   
procope.data.petrinets   
procope.data.purifications   
procope.evaluation.comparison   
procope.evaluation.networkperformance   
procope.examples   
procope.methods.clustering   
procope.methods.interologs   
procope.methods.interologs.blast   
procope.methods.scores   
procope.methods.scores.bootstrap   
procope.tools.namemapping   
 

Classes in procope.data.networks used by procope.data.complexes
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.data.networks
CombinationRules
          A set of combination rules defines how the combination of two networks is accomplished.
CombinationRules.CombinationType
          Defines how the nodes of both source networks are combined into a new set of nodes
CombinationRules.WeightMergePolicy
          Defines how the weights of identical edges are combined for the resulting network
NetworkEdge
          Represents one edge in a ProteinNetwork.
NetworkSearchCallback
          This interface must be implemented by classes which function as callback adapter for the network search functions ProteinNetwork.depthFirstSearch(int, NetworkSearchCallback) and ProteinNetwork.breadthFirstSearch(int, NetworkSearchCallback).
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.data.petrinets
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.data.purifications
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.evaluation.comparison
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.evaluation.networkperformance
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.examples
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.methods.clustering
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.methods.interologs
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.methods.interologs.blast
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.methods.scores
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.methods.scores.bootstrap
ProteinNetwork
          Represents a network of binary protein interactions.
 

Classes in procope.data.networks used by procope.tools.namemapping
ProteinNetwork
          Represents a network of binary protein interactions.