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Packages that use procope.evaluation.complexquality.go | |
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procope.evaluation.complexquality.go |
Classes in procope.evaluation.complexquality.go used by procope.evaluation.complexquality.go | |
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FunctionalSimilarities
This class is extended by classes which calculate a semantic similarity score of two given proteins based on GO information. |
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FunctionalSimilaritiesSchlicker.FunctionalSimilarityMeasure
Functional semilarity measure. |
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GOAnnotations
Represents a set of gene-product to GO-term annotations which are normally read from a file. |
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GONetwork
Represents the ontology network of one GO namespace. |
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GONetwork.Namespace
The GO namespaces. |
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GONetwork.Relationships
GO ontology relationships which can be followed while constructing the ontology network. |
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GOTerm
Represents a single GO term in an ontology network. |
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TermSimilarities
This interface must be implemented by classes which calculate a semantic similarity of two GO terms. |
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TermSimilaritiesSchlicker.TermSimilarityMeasure
The similarity to be used. |
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