btfinisher

Merges the results produced by clustering in the bootstrap scores calculation process. Determines the best overall Markov clustering inflation coefficient, extracts the optimal clusterings which were produced by this coefficient and finally calculates the bootstrap network. This program also calculates and adds shared proteins to the final clustering.

See also: Score network generation

Example call

This example uses the result produced by clustering all bootstrap samples from the examples before (see: btsampler, btclusterer).
cmdline.sh btfinisher -prefix btresults/bt_ -clust bootstrap_complexes.txt -net bootstrap_network.txt


ProCope documentation