Purification data menu
Contains methods to load, save and manipulate purification data sets.
Overview
Load purification data from file
Loads a set of purifications from a user-specified file.
See also: File formats
Save purification data to file
Saves the selected purification data set to a user-specified file.
See also: File formats
Export to Cytoscape
Exports a Cytoscape-compatible XGMML file or directly creates a new graph within Cytoscape when running in plugin mode.
See also: Cytoscape integration
Rename dataset
Assigns a new internal name for the selected dataset.
Dispose dataset
Deletes the purification dataset from the list. Note: This will not affect
an eventual file the dataset was loaded from.
Calculate scores
Calculates a PPI scores network from the selected purification data set.
See also: Score network generation
Merge
Merges the selected purification datasets. The experiment lists of all involved datasets are simply concatenated.
Get bait-prey interactions
Creates a directed network which contains one edge for each bait-prey interaction in the selected purification data sets.