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Packages that use BootstrapMCLClusterings | |
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procope.methods.scores.bootstrap |
Uses of BootstrapMCLClusterings in procope.methods.scores.bootstrap |
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Methods in procope.methods.scores.bootstrap that return BootstrapMCLClusterings | |
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static BootstrapMCLClusterings |
Bootstrap.clusterForSample(ProteinNetwork scores,
ArrayList<Float> inflationCoefficients)
Performs MCL clustering of a given scores network with a set of inflation coefficient. |
static BootstrapMCLClusterings |
Bootstrap.clusterForSample(ProteinNetwork scores,
Float... inflationCoefficients)
Performs MCL clustering of a given scores network with a set of inflation coefficient. |
Method parameters in procope.methods.scores.bootstrap with type arguments of type BootstrapMCLClusterings | |
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static ArrayList<ComplexSet> |
Bootstrap.extractClusteringsWithOptimalInflation(ArrayList<BootstrapMCLClusterings> clusteringLists,
float optimalInflation)
Extracts clusterings created with a given inflation coefficient (should be the optimal one) from a set of clusterings. |
static float |
Bootstrap.findBestInflation(ArrayList<BootstrapMCLClusterings> clusteringsOnlyEff)
Finds the best inflation coefficient from a given set of clusterings. |
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