Uses of Class
data.LocalizationData

Packages that use LocalizationData
data   
evaluation.complexquality   
evaluation.networkperformance   
userinterface.gui   
 

Uses of LocalizationData in data
 

Methods in data that return LocalizationData
static LocalizationData LocalizationDataReader.readLocalizationData(File file)
          Reads localization data from a given file.
static LocalizationData LocalizationDataReader.readLocalizationData(File file, String organism)
          Reads localization data from a given file.
static LocalizationData LocalizationDataReader.readLocalizationData(InputStream stream)
          Reads localization data from an input stream
static LocalizationData LocalizationDataReader.readLocalizationData(InputStream stream, String organism)
          Reads localization data from an input stream
static LocalizationData LocalizationDataReader.readLocalizationData(String file)
          Reads localization data from a given file.
static LocalizationData LocalizationDataReader.readLocalizationData(String file, String organism)
          Reads localization data from a given file.
 

Uses of LocalizationData in evaluation.complexquality
 

Constructors in evaluation.complexquality with parameters of type LocalizationData
Colocalization(LocalizationData data)
          Creates a new colocalization score calculator.
 

Uses of LocalizationData in evaluation.networkperformance
 

Methods in evaluation.networkperformance with parameters of type LocalizationData
static List<ROCCurve> ROC.calculateROCCurves(List<ProteinNetwork> scoreNetworks, ComplexSet reference, ComplexSet referenceForNegativeSet, LocalizationData locData)
          Calculate the ROC curves for a given set of networks.
 

Uses of LocalizationData in userinterface.gui
 

Fields in userinterface.gui declared as LocalizationData
 LocalizationData LocalizationDataSetting.data
           
 

Constructors in userinterface.gui with parameters of type LocalizationData
LocalizationDataSetting(String label, LocalizationData data, String file)