methods.scores.go
Interface FunctionalSimilarities
- All Superinterfaces:
- ProteinSet, ScoresCalculator
- All Known Implementing Classes:
- FunctionalSimilaritiesSchlicker
public interface FunctionalSimilarities
- extends ScoresCalculator
This interface is implemented by classes which calculate a semantic
similarity score of two given proteins based on GO information.
This class is basically just a wrapper of the ScoresCalculator
- Author:
- Jan Krumsiek
Method Summary |
float |
getScore(int protein1,
int protein2)
Calculates the semantic similarity score of two given proteins. |
getScore
float getScore(int protein1,
int protein2)
- Calculates the semantic similarity score of two given proteins.
- Specified by:
getScore
in interface ScoresCalculator
- Parameters:
protein1
- first proteinprotein2
- second protein
- Returns:
- interaction score of the two proteins