ProCope - Protein Complex Prediction and Evaluation Version: 1.2 Software suite for the prediction of protein complexes from purification assay data sets and the evaluation of predicted complexes using experimental data. Web: http://www.bio.ifi.lmu.de/Complexes/ProCope/ Contact: Jan Krumsiek (krumsiek@in.tum.de) Getting started =============== After unpacking the download archive to a directory of your choice run gui.sh for the graphical user interface or cmdline.sh to start the command line tools Use gui.bat and cmdline.bat if you are on Windows. Requirements ============ ProCope requires the Java 5.0 Runtime Environment or later which is freely available at http://www.java.com Documentation ============= You find the documentation files in the doc/ subdirectory (start with index.html) or online at http://www.bio.ifi.lmu.de/Complexes/ProCope/doc/ Package structure ================= *.sh Shell startup scripts *.bat Windows startup scripts COPYPING* License files README.txt this file doc/ ProCope documentation lib/ Compiled binaries src/ ProCope source codes data/ ProCope data files (if downloaded) Check out data/README.txt for detailed information about the datasets License ======= ProCope is released under the GNU Lesser General Public License (LGPL). A copy of the license is contained in the download archive (COPYING.LESSER). Copyright 2008, Teaching and Research Unit Bioinformatics, LMU Munich