| goPlots {StabPerf} | R Documentation |
Read set of ORA_overview-Files and investigates, how stable they are. Plots stability vs. GO-terms.
goPlots(pattern, title=pattern, base=file.path(getOption("edaprakt.tmpdir"), "ora"))
pattern |
Files thats ORA_overviews are read. |
title |
Information that is added to the title of the plot. |
base |
Path where the files are searched. |
Reads all the ORA_overviews. Takes them as features for feature.scores. The scores are ploted as ordered score vs GO-term and saved in plots under base. Also calls printFeatures, with the indices modified to some aggregated information (like hits/total/description) of each category.
featurePlots, featurePrints, feature.scores
goPlots(pattern="ora_0_1_*")