R: Plots a histogram for a given classification or FSS job

plot.job {StabPerf}

R Documentation

Plots a histogram for a given classification or FSS job

Description

Given an FSS job, the frequencies of the selected features are plotted. Given a classification job, the frequencies of the accuracies of the classifier over all sampling steps are plotted.

Usage

plot.job(job.name, method=accuracy, genenames=NULL, breaks=15, xlab=NULL, ylab=NULL, main="", ...)

Arguments

`job.name`	string name of job, beginning with "c_" or "s_" for classifiers or gene selectors, respectively
`method`	function to be used to measure the performance of a classifier
`genenames`	names of genes corresponding to features selected by FSS method
`xlab`	X axis label for plot
`ylab`	Y axis label for plot
`main`	Main heading label for plot

Details

Reads the given checkpoint file and calculates the feature frequencies or accuracy or RCI values, depending on whether its a classification or gene selection job and for classification jobs: depending on the function provided by method. The resulting graphic is displayed, not saved to a file. Use save.plot() to save the graphic conveniently.

Examples

plot.job("c_0_7_2")
plot.job("s_0_2")