Footprint Methods Replicate Consistency
Venn Diagrams for 37C 10min without outlier replicate (r4) and with results for pooled replicates:
37C 30min all replicates:
Different DHS peak callers
TODO
- check PIQ and DNase2TF results
- check between methods overlaps
- compare top ranked footprints
- call methods on conserved DHS peaks instead of peaks per replicate