Packages

halo.data	Provides for the extraction, filtering, handling and saving of expression data.
halo.data.biascorrection	Provides for the correction of bias in the expression data.
halo.data.dataExceptions	Provides exceptions for incorrect data file format Related Documentation For overviews, tutorials, examples, guides, and tool documentation, please see: HALO documentation
halo.examples	Provides easy-to-understand examples for the usage of HALO.
halo.halflife	Provides for the calculation and handling of half-lives.
halo.halflife.alpha	Provides for the calculation of alpha functions.
halo.normalization	Provides for the calculation and handling of normalization.
halo.tools	Provides a set of tools applicable for several uses.
halo.userinterface.cmdline	Provides for the handling of user input and starting of corresponding calculations.
halo.userinterface.cmdline.cmdexceptions	Provides exceptions for incorrect user input.
halo.userinterface.gui	Provides for the generation and handling of a graphical user interface, as well as the starting of corresponding calculations according to user input.
halo.userinterface.gui.graphhandler	Provides for generation of plots and histograms.
halo.userinterface.gui.guitools	Provides a set of tools corresponding to the graphical user interface.
halo.userinterface.gui.session	Provides for the handling, saving and loading of sessions and configuration information.