| Abdelaziz, Ahmed | PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM |
| Ackermann, Jörg | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
| PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells | |
| Albrecht, Mario | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
| Albrecht, Nadine | PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events |
| Altmann, Stefan | PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes |
| Aminisharifabad, Mohammad | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
| Aschoff, Moritz | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Assmann, Anke | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Augustin, Regina | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Bader, Kai Christian | PT-86 | Kai Christian Bader and Harald Meier Interactive primer- and probe-design with CaSSiS |
| Bartel, Jörg | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
| Bartl, Martin | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
| Battke, Florian | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
| Beckers, Johannes | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| Berchtold, Evi | PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays |
| Berger, Anja | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Bleidorn, Christoph | PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. |
| Bobbert, Thomas | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Bock, Franziska | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Bonfert, Thomas | PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data |
| Bonin, Marc | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
| Bonissoni, Stefano | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
| Brandmaier, Stefan | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |
| Britten, Cedrik | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Brunner, Achim | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
| Budczies, Jan | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
| Buezas, David | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
| Bukur, Thomas | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| Buning, Christian | PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies |
| Busch, Melanie | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
| Buttgereit, Frank | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
| Byl, Marius | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| Böcker, Sebastian | PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids |
| Büttner, Florian | PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types |
| Castle, John | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
| Catchpole, Gareth | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Cecil, Alexander | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
| Chang, Antje | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
| Cox, Jürgen | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
| Cramer, Patrick | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Csaba, Gergely | PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data |
| Dabrowski, Piotr Wojtek | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
| Dandekar, Thomas | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
| Daniel, Hannelore | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| De Angelis, Martin Hrabé | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic | |
| De Figueiredo, Luis Filipe | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
| De Graaf, Jos | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Denkert, Carsten | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
| Dietrich, Stefan | PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. |
| Diken, Mustafa | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Domke, Simon | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| Doncheva, Nadezhda T. | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
| Downie, Bryan | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Döring, Claudia | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
| Eckl, Christina | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Eils, Roland | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Ellwanger, Daniel | PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types |
| Endres, Kristina | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Fischer, Matthias | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Fischer-Rosinsky, Antje | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Flemming, Stephan | PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data |
| PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies | |
| Friedel, Caroline C. | PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays |
| PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data | |
| Frishman, Dmitrij | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
| PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments | |
| Fuchs, Helmut | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Gailus-Durner, Valérie | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Geyer, Tihamer | PT-128 | Tihamer Geyer Using Dynamic Graphs to Quantitatively Visualize Agglomeration in Spatial Simulations |
| Glatting, Karl-Heinz | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Gläßer, Christine | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
| Goeker, Markus | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
| Goltz, Michael | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
| Gormanns, Philipp | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
| Gramzow, Lydia | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
| Greeff, Michael | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Grote, Andreas | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
| Groth, Marco | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Grüning, Björn Andreas | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
| PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data | |
| Grützkau, Andreas | PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data |
| Grützmann, Konrad | PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids |
| Gumbel, Markus | PT-33 | Rainer Von Den Berken and Markus Gumbel OODB4Genomics: An object-oriented database approach for biomedical data in clinical bioinformatics |
| Guthke, Reinhard | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
| Götz, Sebastian | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Günther, Stefan | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
| PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data | |
| Haase, Ulrike | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
| Haberer, Georg | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
| Hansen, Jens | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Hansmann, Martin-Leo | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
| Hartmann, Stefanie | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
| PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. | |
| Haubold, Bernhard | PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences |
| Hauner, Hans | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Heinke, Florian | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
| Hill, Natascha | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
| PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. | |
| Hische, Manuela | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Hoesel, Bastian | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| Hoffmann, Daniel | PT-101 | Rocio Rebollido-Rios and Daniel Hoffmann The role of calcium ions for the stability of Sonic Hedgehog protein |
| Hoffmann, Nils | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
| Hotz-Wagenblatt, Agnes | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Huson, Daniel | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| Häupl, Thomas | PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data |
| PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies | |
| PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data | |
| Illner, Katrin | PT-106 | Katrin Illner Bayesian blind source separation of microarray data using graph-delayed correlation |
| Istvanffy, Rouzanna | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Ivankov, Dmitry | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
| Jahn, Niels | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Jin, Yuliang | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
| Jäger, Günter | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
| Kacprowski, Tim | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
| Kahle, Melanie | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
| Kaleta, Christoph | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
| PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans | |
| Kandavel, Palani Kannan | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
| Kara, Mahmut | PT-120 | Mahmut Kara and Martin Zacharias Comparison of the fine structure and dynamics of damaged and intact DNA |
| Kastenmüller, Gabriele | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Keidel, Eva | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
| Keller, Daniela | PT-96 | Daniela Keller and Joerg Schultz Language dynamics revealed by morpheme networks |
| Kellermann, Josef | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
| Kirrbach, Jan | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
| Klauschen, Frederick | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
| Klenk, Hans-Peter | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
| Koch, Ina | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
| PT-36 | Hendrik Schäfer and Ina Koch A pipeline to explore alternative splicing events | |
| PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies | |
| PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana | |
| PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells | |
| Koch, Philipp | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Kondofersky, Ivan | PT-25 | Ivan Kondofersky Estimating hidden components in kinetic systems using functional data analysis |
| Koslowski, Michael | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Krause, Antje | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
| Kreiter, Sebastian | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Krug, Susanne | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Krumsiek, Jan | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Kröger, Monika | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Kuhn, Peer-Hendrik | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Kurtz, Stefan | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
| PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences | |
| Kuster, Bernhard | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
| König, Rainer | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
| Körner, Robert | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
| PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
| PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
| Kötzing, Martin | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
| Küffner, Robert | PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests |
| PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes | |
| PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks | |
| Labudde, Dirk | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
| Langosch, Dieter | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
| Larhlimi, Abdelhalim | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Lariviere, Laurent | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Lechene, Claude | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
| Lemeer, Simone | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
| Lengger, Christoph | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Lentes, Bernd | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Leonhardt, Jörn | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
| Leow, Alexander | PT-67 | Alexander Leow IntronBase: A new resource for mining gene structure of orthologous genes from nine metazoa. |
| Lichtenthaler, Stefan F. | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Lindner, Martin S. | PT-123 | Martin S. Lindner and Bernhard Y. Renard Risks for Specificity and Sensitivity in Metagenomic Classification Experiments |
| Lottspeich, Friedrich | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
| Lucas, Xavier | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
| Löwer, Martin | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
| Lühr, Timo | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
| Macguill, Martin | PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine |
| Mader, Malte | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
| Maier, Holger | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Maier, Kerstin | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Makse, Hernan | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
| Mann, Matthias | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
| Marx, Harald | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
| Matthes, Michaela | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| May, Patrick | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
| Mayer, Daniela | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Mayer, Klaus F. X. | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
| Meier, Harald | PT-86 | Kai Christian Bader and Harald Meier Interactive primer- and probe-design with CaSSiS |
| Mewes, Hans-Werner | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events | |
| PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types | |
| Meyer, Tina | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
| Mitra, Suparna | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| Munaretto, Cornelia | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
| Naeem, Haroon | PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests |
| Neschen, Susanne | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
| Nieselt, Kay | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
| Nilla, Santosh | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
| Nitsche, Andreas | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
| Novotarskyi, Sergii | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
| PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
| PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
| Nöthen, Joachim | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
| Oostendorp, Robert A.J. | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Parikesit, Arli A. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
| Patel, Vipul | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
| Pecinka, Ales | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
| Peschel, Christian | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Petri, Tobias | PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays |
| PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
| Petzold, Andreas | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Pevzner, Pavel | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
| Pfeiffer, Andreas | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Pirkl, Nicole | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Placzek, Sandra | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
| Platzer, Matthias | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Poczatek, Joseph C. | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
| Prakash, Nilima | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Preusse, Martin | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Prohaska, Sonja J. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
| Przemeck, Gerhard K. H. | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| Quester, Susanne | PT-92 | Susanne Quester and Dietmar Schomburg Enzyme Detector - integrated genomic enzyme function prediction |
| Rattei, Thomas | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database | |
| PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes | |
| PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then | |
| PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences | |
| Rebollido-Rios, Rocio | PT-101 | Rocio Rebollido-Rios and Daniel Hoffmann The role of calcium ions for the stability of Sonic Hedgehog protein |
| Reckow, Stefan | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
| Reichwald, Kathrin | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Reinhardt, Sven | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Renard, Bernhard Y. | PT-123 | Martin S. Lindner and Bernhard Y. Renard Risks for Specificity and Sensitivity in Metagenomic Classification Experiments |
| Renard, Bernhard | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| PT-121 | Franziska Zickmann and Bernhard Renard Influence of Target and Decoy Database Size on Peptide Identification Confidence | |
| Rex, René | PT-114 | René Rex and Dietmar Schomburg Xeledon: Efficient enumeration of all steady state cycles in metabolic networks |
| Ried, Christian | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
| Rist, Manuela | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Ristow, Michael | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
| Rother, Michael | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
| PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
| Sahin, Ugur | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
| Sahlin, Ullrika | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |
| Schaefer, Benjamin | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
| Schechter, Julia | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
| Scheer, Maurice | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
| PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
| Schemarow, Ludmila | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| Schiemann, Matthias | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Schleiff, Enrico | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
| Schmidt, Thorsten | PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events |
| Schmitt, Wolfgang D | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
| Schmitz, Alexander | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
| Schneeberger, Korbinian | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
| Schneltzer, Elida | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| Scholtalbers, Jelle | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
| Schomburg, Dietmar | PT-91 | Thomas Ulas and Dietmar Schomburg Genome-scale reconstruction and analysis of the metabolic network in the hyperthermophilic Archaeon Sulfolobus solfataricus |
| PT-92 | Susanne Quester and Dietmar Schomburg Enzyme Detector - integrated genomic enzyme function prediction | |
| PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models | |
| PT-114 | René Rex and Dietmar Schomburg Xeledon: Efficient enumeration of all steady state cycles in metabolic networks | |
| PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
| Schomburg, Ida | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
| PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
| Schulte-Wrede, Ursula | PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data |
| Schultz, Joerg | PT-96 | Daniela Keller and Joerg Schultz Language dynamics revealed by morpheme networks |
| Schulz, Daniel | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Schuster, Stefan | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
| PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans | |
| PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids | |
| Schuster, Stephan | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| Schwalb, Björn | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Schwarz, Franziska | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Schäfer, Hendrik | PT-36 | Hendrik Schäfer and Ina Koch A pipeline to explore alternative splicing events |
| Schäfer, Tim | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
| Selbig, Joachim | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Selzer, Paul M. | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
| Senger, Christian | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
| Simon, Ronald | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
| Skurk, Thomas | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Sommer, Michael | PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences |
| Sotriffer, Christoph | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
| Spieler, David | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
| Spranger, Joachim | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Stadermann, Kai | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
| Stadler, Peter F. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
| Steinbiss, Sascha | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
| Steinkamp, Ralph | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
| Stoye, Jens | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
| Ströhlein, Andreas | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
| Stückler, Ferdinand | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Stümpflen, Volker | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types | |
| PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice | |
| Suhre, Karsten | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| Sun, Mai | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Sushko, Iurii | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
| PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
| PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
| Söhngen, Carola | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
| Sörensen, Till | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
| PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data | |
| Taudien, Stefan | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
| Tavakkolkhah, Pegah | PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks |
| Teetz, Wolfram | PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM |
| Tetko, Igor | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
| PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
| PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables | |
| PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
| Theis, Fabian J. | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
| PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
| Theißen, Günter | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
| Thieme, Christoph J. | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
| Thomma, Anton | PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes |
| Tiedemann, Hendrik B. | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
| Tiedemann, Ralph | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
| Tran, Hon Q. | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
| Tresch, Achim | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
| Trümbach, Dietrich | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
| Turaev, Dmitrij | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
| PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences | |
| Turck, Chris W. | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
| Tuukkanen, Anne | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
| Tyanova, Stefka | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
| Türeci, Özlem | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
| Ulas, Thomas | PT-91 | Thomas Ulas and Dietmar Schomburg Genome-scale reconstruction and analysis of the metabolic network in the hyperthermophilic Archaeon Sulfolobus solfataricus |
| Velikkakam James, Geo | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
| Vilne, Baiba | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
| Vogt-Weisenhorn, Daniela | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| Von Den Berken, Rainer | PT-33 | Rainer Von Den Berken and Markus Gumbel OODB4Genomics: An object-oriented database approach for biomedical data in clinical bioinformatics |
| Vorberg, Susann | PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies |
| Weber, Nico | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
| Weinmaier, Thomas | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
| Werner, Sarah | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
| Widder, Stefanie | PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes |
| Wilhelm, Mathias | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
| Willmitzer, Lothar | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
| Willrodt, Dirk | PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences |
| Wolf, Verena | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
| Wurst, Wolfgang | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
| PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
| Zacharias, Martin | PT-120 | Mahmut Kara and Martin Zacharias Comparison of the fine structure and dynamics of damaged and intact DNA |
| Zickmann, Franziska | PT-121 | Franziska Zickmann and Bernhard Renard Influence of Target and Decoy Database Size on Peptide Identification Confidence |
| Zimmer, Ralf | PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays |
| PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data | |
| PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
| PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests | |
| PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes | |
| PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks | |
| Öberg, Tomas | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |