Dr. Markus Joppich

Habilitand

	E-Mail:
	Telefon:	+49-89-2180-4045
	Adresse:	Lehr- und Forschungseinheit Bioinformatik Institut für Informatik Ludwig-Maximilians-Universität München
		Amalienstr. 17, 80333 München
	Raum:	408, 4. Etage

Please feel free to visit my GitHub!
You can also follow me on Twitter or Mastodon .

ForschungResearch

scRNA-seq data analysis
Imaging Mass Spectrometry (IMS) data analysis
Differential gene expression in high-throughput data
Answering integrative questions for high-throughput data (scRNA-seq, RNA-seq, IMS)
Automating high-throughput data analysis
Text mining and integrative applications thereof
High-performance computing (GPGPU, OpenMP, OpenACC, hardware transactional memory)

iGEM CompetitioniGEM Competition

iGEM’s main program is the iGEM Competition, an annual, world wide synthetic biology event aimed at undergraduate university students, as well as high school and graduate students. The iGEM Competition gives students the opportunity to push the boundaries of synthetic biology by tackling everyday issues facing the world. Multidisciplinary teams work together to design, build, test, and measure a system of their own design using interchangeable biological parts and standard molecular biology techniques. iGEM teams work inside and outside the lab, creating sophisticated projects that strive to create a positive contribution to their communities and the world. Every year nearly 6,000 people dedicate their summer to iGEM and then come together in the fall to present their work and compete at the annual Giant Jamboree (Source: iGEM).

What I love most about the iGEM competition is its extremely interdisciplinary character. Students from multiple different disciplines work together on one project, supporting this very project with their expertise!
I participated in iGEM as a student with the Aachen 2014 team and supervised the Munich (LMU+TUM) 2018 team.

LehreTeaching

Semester	Course
SS2021	Algorithmische Bioinformatik 1 NEAP
WS2020/2021	GOBI Blockteil Programmierpraktikum
SS2020	Algorithmische Bioinformatik 1
WS2019/2020	Algorithmische Bioinformatik 2 Programmierpraktikum
SS2019	Algorithmische Bioinformatik 1
WS2018/2019	Algorithmische Bioinformatik 2 Programmierpraktikum
SS2018	Algorithmische Bioinformatik 1
WS2017/2018	Algorithmische Bioinformatik 2 Programmierpraktikum
SS2017	Algorithmische Bioinformatik 1
WS2016/2017	Algorithmische Bioinformatik 2 Programmierpraktikum
SS2016	Algorithmische Bioinformatik 1
WS2015/2016	Algorithmische Bioinformatik 2 Programmierpraktikum
SS2015	Algorithmische Bioinformatik 1 Proseminar Bioinformatik