Armin Hadziahmetovic

E-Mail:
TelefonPhone:	+49-89-2180-4046
Adresseaddress :	Lehr- und Forschungseinheit Bioinformatik Teaching and Research Unit Bioinformatics Institut für Informatik Ludwig-Maximilians-Universität München
	Amalienstr. 17, 80333 MünchenMunich, Germany
Raum:	A407, 4. Etage

ForschungResearch

Development of methods and frameworks for:

(Multi-) Differential analysis of biological entities
Mapping and quantification of sequencing data
MicroRNA identification and functional inference
Text mining, document similarity, and relation extraction
Data processing workflows

LehreTeaching

WS 2024/25	Algorithmische Bioinformatik II
	Praktikum Genomorientierte Bioinformatik (GoBI)
	Programmierpraktikum Bioinformatik
SS 2024	Algorithmische Bioinformatik I
WS 2023/24	Programmierpraktikum Bioinformatik
WS 2023/24	Softwareentwicklungspraktikum (SEP)
SS 2023	Masterpraktikum Bioinformatik
SS 2023	Fortgeschrittenenpraktikum Bioinformatik
WS 2022/23	Praktikum Genomorientierte Bioinformatik (GoBI)
	Programmierpraktikum Bioinformatik
	Fortgeschrittenenpraktikum Bioinformatik
SS 2022	Masterpraktikum Bioinformatik
SS 2022	Fortgeschrittenenpraktikum Bioinformatik
WS 2021/22	Praktikum Genomorientierte Bioinformatik (GoBI)
	Programmierpraktikum Bioinformatik
	Fortgeschrittenenpraktikum Bioinformatik
SS 2021	Masterpraktikum Bioinformatik
SS 2021	Algorithmische Bioinformatik I
WS 2020/21	Praktikum Genomorientierte Bioinformatik (GoBI)
WS 2020/21	Programmierpraktikum Bioinformatik

Betreute ArbeitenSupervised Work

Aaron Roth, Efficient Read Mapping to a Pangenomic Reference Region with Splice-Graphs, Bachelor Thesis, LFE Bioinformatik, LMU München, 2024.

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Leonie Pohl, Beyond One Reference Genome: Pangenomic Variant Calling for Personalized Medicine, Master Thesis, LFE Bioinformatik, LMU München, 2024.

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Lukas Jaeger, Bioinformatic Methods of Individual and Pangenome Variations, Bachelor Thesis, LFE Bioinformatik, LMU München, 2023.

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Xiheng He, Annotation and Assessment of AlphaFold2 Structures for Protein Isoforms, Bachelor Thesis, LFE Bioinformatik, LMU München, 2023.

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David Wagemann, Conserved Binding Sites for Splicing and Alternative Splicing, Bachelor Thesis, LFE Bioinformatik, LMU München, 2023.

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Samuel Klein, Cross Species protein Isoform Alignment (CSI-A), Master Thesis, LFE Bioinformatik, LMU München, 2022.

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Leonie Pohl, Integrative and Differential Analysis of Gene Expression and Alternative Splicing, Bachelor Thesis, LFE Bioinformatik, LMU München, 2021.

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Alexandra Schubö, Analysis of miRNA-Mediated Virus-Host Interactions in SARS-CoV-2 Infections, Bachelor Thesis, LFE Bioinformatik, LMU München, 2021.

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PublikationenPublications

2022

Papers

Alexandra Schubö, Armin Hadziahmetovic, Markus Joppich, Ralf Zimmer, Collecting SARS-CoV-2 Encoded miRNAs via Text Mining, Bioinformatics and Biomedical Engineering, Springer International Publishing, pp. 429–441, 2022.

2020

Theses

Armin Hadziahmetovic, Assessment of Differential Alternative Splicing Methods, Master Thesis, LFE Bioinformatik, LMU München, 2020.

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2018

Theses

Armin Hadziahmetovic, Methods for Interactive analysis of Differential Alternative Splicing (MIDAS), Bachelor Thesis, LFE Bioinformatik, LMU München, 2018.

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LebenslaufCurriculum Vitae

Seit Okt 2020Since Oct 2020	Wissenschaftlicher Mitarbeiter, LFE Bioinformatik, LMU München Doctoral student, LFE Bioinformatics, LMU Munich
2017-2020	Studentische Hilfskraft, LFE Bioinformatik, LMU München Student assistant, Bioinformatics Group, University of Munich (LMU Munich)
2014-2020	Studium der Bioinformatik an der LMU München und der TU München, Abschluss: M.Sc. Bioinformatics course, University of Munich (LMU Munich) and Technical University of Munich (TU Munich), M.Sc.