| HT | HT-02 | Ludwig Geistlinger
From Sets To Graphs: Towards a Realistic Enrichment Analysis of Transcriptomic Systems |
| HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker
Fragmentation trees from mass spectra: a step towards metabolite identification |
| HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski
Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
| HT-21 | Caroline C. Friedel, Lars Dölken and Ralf Zimmer
High resolution profiling of RNA synthesis and decay |
| HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis
Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data |
| HT-28 | Christian Schudoma, Abdelhalim Larhlimi and Dirk Walther
The influence of the local sequence environment on RNA loop structures |
| HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette
Structator: fast index-based search for RNA sequence-structure patterns |
| HT-46 | Sebastian Klie
Metabolomic and transcriptomic stress response of Escherichia coli |
| HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse
De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference |
| HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook
A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
| JT | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause
Identification of shared components of protein complexes |
| JT-20 | Huy Dinh, Ortrun Mittelsten Scheid and Arndt Von Haeseler
MethColor: a computational approach to uncover DNA methylation heterogeneity |
| JT-27 | Haroon Naeem, Ralf Zimmer and Robert Küffner
Rigorous assessment of gene set enrichment tests |
| JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis
Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
| JT-40 | Eva Vennmann, Nadine Schneider and Matthias Rarey
Discrimination of permanent and transient heterodimers: The real challenge in the classification of protein-protein interactions |
| JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch
One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
| JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis
Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
| JT-48 | Matthias Böck, Constanze Schmitt and Stefan Kramer
A Study of Dynamic Time Warping for the Inference of Gene Regulatory Relationships |
| JT-49 | Florian Erhard and Ralf Zimmer
Detecting outlier peptides in quantitative High-Troughput mass spectrometry |
| JT-50 | Robert Pesch and Ralf Zimmer
To transfer or not to transfer - Complementing the eukaryotic protein-protein interactome |
| JT-54 | Lukas Windhager, Jonas Zierer and Ralf Zimmer
Module Extraction from Ensembles of Networks |
| JT-56 | Martin Preusse, Andreas Kowarsch, Carsten Marr and Fabian J. Theis
miTALOS: Analyzing the tissue-specific regulation of signaling pathways by human and mouse microRNAs |
| JT-59 | Andre Dau and Johannes Krugel
tt-analyze and tt-generate: Tools to Analyze and Generate Sequences with Trained Statistical Properties |
| JT-64 | Alena Mysickova and Martin Vingron
Detection of interacting transcription factors in human tissues using predicted DNA binding affinity |
| JT-65 | Thomas Hoffmann and Iris Antes
Modeling the variable regions of T-Cell Receptors |
| JT-68 | Manuel Andreas Glaser and Iris Antes
Docking Peptides into MHC Class II Complexes |
| RT | RT-19 | Martin Macguill, Tobias Petri and Ralf Zimmer
On Risk Stratification Strategies in Intensive Care Medicine |
| RT-31 | Jiabin Huang and Björn Voß
RNAHeliCes - Folding space analysis based on position aware structure abstraction |
| RT-34 | Ralf Eggeling, Jens Keilwagen and Ivo Grosse
Recognition of splice sites and transcription factor binding sites using generalized maximum entropy models |
| RT-44 | Orland Gonzalez, Georg Malterer, Ralf Zimmer and Jürgen Haas
Guilt by Association in Human RNAi Screens |
| RT-47 | Mathias Möhl, Christina Schmiedl and Shay Zakov
Sparsification in Algebraic Dynamic Programming |
| RT-55 | Anna Katharina Dehof, Hans-Peter Lenhof and Andreas Hildebrandt
Predicting Protein NMR Chemical Shifts in the Presence of Ligands and Ions using Force Field-based Features |
| RT-61 | Marco Mernberger and Eyke Huellermeier
Prediction of Protein Localization for Specialized Compartments using Time Series Kernels |
| RT-62 | Andreas S. Richter and Rolf Backofen
Accessibility and conservation in bacterial small RNA-mRNA interactions and implications for genome-wide target predictions |