Abdelaziz, Ahmed | PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM |
Ackermann, Jörg | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells | |
Adamski, Jerzy | HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data |
Albrecht, Mario | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
Albrecht, Nadine | PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events |
Altmann, Stefan | PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes |
Aminisharifabad, Mohammad | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
Antes, Iris | JT-65 | Thomas Hoffmann and Iris Antes Modeling the variable regions of T-Cell Receptors |
JT-68 | Manuel Andreas Glaser and Iris Antes Docking Peptides into MHC Class II Complexes | |
Arnold, Anne | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
Aschoff, Moritz | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Assmann, Anke | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Augustin, Regina | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Backofen, Rolf | RT-62 | Andreas S. Richter and Rolf Backofen Accessibility and conservation in bacterial small RNA-mRNA interactions and implications for genome-wide target predictions |
HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette Structator: fast index-based search for RNA sequence-structure patterns | |
Bader, Kai Christian | PT-86 | Kai Christian Bader and Harald Meier Interactive primer- and probe-design with CaSSiS |
Bartel, Jörg | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
Bartl, Martin | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
Battke, Florian | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
Bauerfeind, Anja | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Beckers, Johannes | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
Beckstette, Michael | HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette Structator: fast index-based search for RNA sequence-structure patterns |
Berchtold, Evi | PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays |
Berger, Anja | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Blankenberg, Stefan | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Bleidorn, Christoph | PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. |
Bobbert, Thomas | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Bock, Franziska | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Bonfert, Thomas | PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data |
Bonin, Marc | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
Bonissoni, Stefano | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
Brandmaier, Stefan | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |
Britten, Cedrik | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Brunner, Achim | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
Budczies, Jan | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
Buezas, David | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
Bukur, Thomas | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
Buning, Christian | PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies |
Busch, Melanie | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
Buttgereit, Frank | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
Byl, Marius | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
Böck, Matthias | JT-48 | Matthias Böck, Constanze Schmitt and Stefan Kramer A Study of Dynamic Time Warping for the Inference of Gene Regulatory Relationships |
Böcker, Sebastian | HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker Fragmentation trees from mass spectra: a step towards metabolite identification |
PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids | |
Böttcher, Christoph | HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker Fragmentation trees from mass spectra: a step towards metabolite identification |
Büttner, Florian | PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types |
Castle, John | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
Catchpole, Gareth | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Cecil, Alexander | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
Chang, Antje | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
Cook, Stuart | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Cox, Jürgen | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
Cramer, Patrick | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Csaba, Gergely | PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data |
Dabrowski, Piotr Wojtek | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
Dandekar, Thomas | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
Daniel, Hannelore | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Dau, Andre | JT-59 | Andre Dau and Johannes Krugel tt-analyze and tt-generate: Tools to Analyze and Generate Sequences with Trained Statistical Properties |
De Angelis, Martin Hrabé | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic | |
De Figueiredo, Luis Filipe | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
De Graaf, Jos | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Dehof, Anna Katharina | RT-55 | Anna Katharina Dehof, Hans-Peter Lenhof and Andreas Hildebrandt Predicting Protein NMR Chemical Shifts in the Presence of Ligands and Ions using Force Field-based Features |
Denkert, Carsten | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
Dietrich, Stefan | PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. |
Diken, Mustafa | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Dinh, Huy | JT-20 | Huy Dinh, Ortrun Mittelsten Scheid and Arndt Von Haeseler MethColor: a computational approach to uncover DNA methylation heterogeneity |
Domke, Simon | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
Doncheva, Nadezhda T. | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
Downie, Bryan | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Dölken, Lars | HT-21 | Caroline C. Friedel, Lars Dölken and Ralf Zimmer High resolution profiling of RNA synthesis and decay |
Döring, Claudia | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
Dümcke, Sebastian | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
Eckl, Christina | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Eggeling, Ralf | RT-34 | Ralf Eggeling, Jens Keilwagen and Ivo Grosse Recognition of splice sites and transcription factor binding sites using generalized maximum entropy models |
Eigenbrod, Ole | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Eils, Roland | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Ellwanger, Daniel | PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types |
Endres, Kristina | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Erhard, Florian | JT-49 | Florian Erhard and Ralf Zimmer Detecting outlier peptides in quantitative High-Troughput mass spectrometry |
Etzold, Steffanie | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
Filipczyk, Adam | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
Fischer, Matthias | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Fischer-Rosinsky, Antje | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Flemming, Stephan | PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data |
PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies | |
Friedel, Caroline C. | HT-21 | Caroline C. Friedel, Lars Dölken and Ralf Zimmer High resolution profiling of RNA synthesis and decay |
PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays | |
PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data | |
Frishman, Dmitrij | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments | |
Fuchs, Helmut | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Gailus-Durner, Valérie | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Geistlinger, Ludwig | HT-02 | Ludwig Geistlinger From Sets To Graphs: Towards a Realistic Enrichment Analysis of Transcriptomic Systems |
Geyer, Tihamer | PT-128 | Tihamer Geyer Using Dynamic Graphs to Quantitatively Visualize Agglomeration in Spatial Simulations |
Glaser, Manuel Andreas | JT-68 | Manuel Andreas Glaser and Iris Antes Docking Peptides into MHC Class II Complexes |
Glatting, Karl-Heinz | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Gläßer, Christine | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
Goeker, Markus | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
Goltz, Michael | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
Gonzalez, Orland | RT-44 | Orland Gonzalez, Georg Malterer, Ralf Zimmer and Jürgen Haas Guilt by Association in Human RNAi Screens |
Gormanns, Philipp | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
Gramzow, Lydia | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
Grau, Jan | HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference |
Greeff, Michael | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Greiter, Matthias | JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
Grimbs, Sergio | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
Grosse, Ivo | RT-34 | Ralf Eggeling, Jens Keilwagen and Ivo Grosse Recognition of splice sites and transcription factor binding sites using generalized maximum entropy models |
HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference | |
Grote, Andreas | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
Groth, Marco | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Grüning, Björn Andreas | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data | |
Grützkau, Andreas | PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data |
Grützmann, Konrad | PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids |
Gumbel, Markus | PT-33 | Rainer Von Den Berken and Markus Gumbel OODB4Genomics: An object-oriented database approach for biomedical data in clinical bioinformatics |
Guthke, Reinhard | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
Götz, Sebastian | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
Günther, Stefan | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data | |
Haas, Jürgen | RT-44 | Orland Gonzalez, Georg Malterer, Ralf Zimmer and Jürgen Haas Guilt by Association in Human RNAi Screens |
Haase, Ulrike | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
Haberer, Georg | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
Hansen, Jens | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Hansmann, Martin-Leo | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
Hartmann, Stefanie | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. | |
Haubold, Bernhard | PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences |
Hauner, Hans | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Heinig, Matthias | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Heinke, Florian | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
Hildebrandt, Andreas | RT-55 | Anna Katharina Dehof, Hans-Peter Lenhof and Andreas Hildebrandt Predicting Protein NMR Chemical Shifts in the Presence of Ligands and Ions using Force Field-based Features |
Hill, Natascha | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
PT-102 | Stefan Dietrich, Natascha Hill, Christoph Bleidorn and Stefanie Hartmann Survey & evolutionary analysis of snoRNAs in annelid introns. | |
Hische, Manuela | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Hoesel, Bastian | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
Hoffmann, Daniel | PT-101 | Rocio Rebollido-Rios and Daniel Hoffmann The role of calcium ions for the stability of Sonic Hedgehog protein |
Hoffmann, Nils | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
Hoffmann, Thomas | JT-65 | Thomas Hoffmann and Iris Antes Modeling the variable regions of T-Cell Receptors |
Hoppe, Philipp S. | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
Hotz-Wagenblatt, Agnes | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Huang, Jiabin | RT-31 | Jiabin Huang and Björn Voß RNAHeliCes - Folding space analysis based on position aware structure abstraction |
Hubner, Norbert | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Huellermeier, Eyke | RT-61 | Marco Mernberger and Eyke Huellermeier Prediction of Protein Localization for Specialized Compartments using Time Series Kernels |
Hug, Sabine | JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
Huson, Daniel | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
Häupl, Thomas | PT-134 | Stephan Flemming, Björn Andreas Grüning, Thomas Häupl and Stefan Günther A framework for analysis of DNA methylation data |
PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies | |
PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data | |
Ibn-Salem, Jonas | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Illig, Thomas | HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data |
Illner, Katrin | PT-106 | Katrin Illner Bayesian blind source separation of microarray data using graph-delayed correlation |
Istvanffy, Rouzanna | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Ivankov, Dmitry | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
Jahn, Niels | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Jin, Yuliang | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
Jäger, Günter | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
Kacprowski, Tim | PT-110 | Tim Kacprowski, Nadezhda T. Doncheva, David Buezas and Mario Albrecht Disease gene prioritization by combining network information and functional knowledge |
Kahle, Melanie | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
Kaleta, Christoph | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans | |
Kandavel, Palani Kannan | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
Kara, Mahmut | PT-120 | Mahmut Kara and Martin Zacharias Comparison of the fine structure and dynamics of damaged and intact DNA |
Kastenmüller, Gabriele | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Keidel, Eva | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
Keilwagen, Jens | RT-34 | Ralf Eggeling, Jens Keilwagen and Ivo Grosse Recognition of splice sites and transcription factor binding sites using generalized maximum entropy models |
HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference | |
Keller, Daniela | PT-96 | Daniela Keller and Joerg Schultz Language dynamics revealed by morpheme networks |
Kellermann, Josef | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
Kirrbach, Jan | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
Klauschen, Frederick | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
Klenk, Hans-Peter | PT-79 | Palani Kannan Kandavel, Markus Goeker and Hans-Peter Klenk Inferring functional genome classifications from their annotated proteins |
Klie, Sebastian | HT-46 | Sebastian Klie Metabolomic and transcriptomic stress response of Escherichia coli |
Knorr, Stephan | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Koch, Ina | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
PT-36 | Hendrik Schäfer and Ina Koch A pipeline to explore alternative splicing events | |
PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies | |
PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana | |
PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells | |
Koch, Philipp | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Kondofersky, Ivan | PT-25 | Ivan Kondofersky Estimating hidden components in kinetic systems using functional data analysis |
Koseska, Aneta | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
Koslowski, Michael | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Kowarsch, Andreas | JT-56 | Martin Preusse, Andreas Kowarsch, Carsten Marr and Fabian J. Theis miTALOS: Analyzing the tissue-specific regulation of signaling pathways by human and mouse microRNAs |
Kramer, Stefan | JT-48 | Matthias Böck, Constanze Schmitt and Stefan Kramer A Study of Dynamic Time Warping for the Inference of Gene Regulatory Relationships |
Krause, Antje | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
Krause, Roland | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Kreiter, Sebastian | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Krug, Susanne | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Krugel, Johannes | JT-59 | Andre Dau and Johannes Krugel tt-analyze and tt-generate: Tools to Analyze and Generate Sequences with Trained Statistical Properties |
Krumsiek, Jan | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data | |
PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios | |
Kröger, Monika | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Kuhn, Peer-Hendrik | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Kurths, Jürgen | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
Kurtz, Stefan | HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette Structator: fast index-based search for RNA sequence-structure patterns |
PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context | |
PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences | |
Kuster, Bernhard | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
König, Rainer | PT-107 | Moritz Aschoff, Agnes Hotz-Wagenblatt, Karl-Heinz Glatting, Matthias Fischer, Roland Eils and Rainer König Computational Analysis of Alternative Splicing in Cancer using RNA-Seq |
Körner, Robert | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
Kötzing, Martin | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
Küffner, Robert | JT-27 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests |
PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests | |
PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes | |
PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks | |
Labudde, Dirk | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
Langosch, Dieter | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
Larhlimi, Abdelhalim | HT-28 | Christian Schudoma, Abdelhalim Larhlimi and Dirk Walther The influence of the local sequence environment on RNA loop structures |
PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose | |
Lariviere, Laurent | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Lechene, Claude | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
Lemeer, Simone | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
Lengger, Christoph | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Lenhof, Hans-Peter | RT-55 | Anna Katharina Dehof, Hans-Peter Lenhof and Andreas Hildebrandt Predicting Protein NMR Chemical Shifts in the Presence of Ligands and Ions using Force Field-based Features |
Lentes, Bernd | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
Leonhardt, Jörn | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
Leow, Alexander | PT-67 | Alexander Leow IntronBase: A new resource for mining gene structure of orthologous genes from nine metazoa. |
Li, Wei Bo | JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
Lichtenthaler, Stefan F. | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Lindner, Martin S. | PT-123 | Martin S. Lindner and Bernhard Y. Renard Risks for Specificity and Sensitivity in Metagenomic Classification Experiments |
Lottspeich, Friedrich | PT-14 | Achim Brunner, Eva Keidel, Josef Kellermann and Friedrich Lottspeich ICPLQuant - a directed proteomics tool for isotope labelling proteomics |
Lucas, Xavier | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
Löwer, Martin | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
Lühr, Timo | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
Macguill, Martin | RT-19 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine |
PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
Maddula, Ravi Kumar | HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker Fragmentation trees from mass spectra: a step towards metabolite identification |
Mader, Malte | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
Maier, Holger | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Maier, Kerstin | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Makse, Hernan | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
Malterer, Georg | RT-44 | Orland Gonzalez, Georg Malterer, Ralf Zimmer and Jürgen Haas Guilt by Association in Human RNAi Screens |
Mann, Matthias | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
Marr, Carsten | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
JT-56 | Martin Preusse, Andreas Kowarsch, Carsten Marr and Fabian J. Theis miTALOS: Analyzing the tissue-specific regulation of signaling pathways by human and mouse microRNAs | |
Martin, Dietmar | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
Marx, Harald | PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database |
Matthes, Michaela | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
May, Patrick | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
Mayer, Daniela | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
Mayer, Klaus F. X. | PT-81 | Christine Gläßer, Georg Haberer and Klaus F. X. Mayer Retrograde Signaling in Plants: its nature and contributing pathways |
Mehnert, Daniel H. | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Meier, Harald | PT-86 | Kai Christian Bader and Harald Meier Interactive primer- and probe-design with CaSSiS |
Mernberger, Marco | RT-61 | Marco Mernberger and Eyke Huellermeier Prediction of Protein Localization for Specialized Compartments using Time Series Kernels |
Mewes, Hans-Werner | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events | |
PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types | |
Meyer, Fernando | HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette Structator: fast index-based search for RNA sequence-structure patterns |
Meyer, Tina | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
Mitra, Suparna | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
Mittelsten Scheid, Ortrun | JT-20 | Huy Dinh, Ortrun Mittelsten Scheid and Arndt Von Haeseler MethColor: a computational approach to uncover DNA methylation heterogeneity |
Munaretto, Cornelia | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
Mysickova, Alena | JT-64 | Alena Mysickova and Martin Vingron Detection of interacting transcription factors in human tissues using predicted DNA binding affinity |
Möhl, Mathias | RT-47 | Mathias Möhl, Christina Schmiedl and Shay Zakov Sparsification in Algebraic Dynamic Programming |
Naeem, Haroon | JT-27 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests |
PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests | |
Neschen, Susanne | PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice |
Nieselt, Kay | PT-90 | Günter Jäger, Florian Battke and Kay Nieselt TIALA - Visual Time Series Alignment Analysis |
Nikoloski, Zoran | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
Nilla, Santosh | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
Nitsche, Andreas | PT-125 | Piotr Wojtek Dabrowski, Michael Goltz and Andreas Nitsche An alignment editing tool for the design of nucleotide sequence-based assays |
Novotarskyi, Sergii | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
Nöthen, Joachim | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
Oostendorp, Robert A.J. | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Otto, Raik | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Paponov, Ivan A. | HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference |
Parikesit, Arli A. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
Patel, Vipul | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
Pecinka, Ales | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
Pesch, Robert | JT-50 | Robert Pesch and Ralf Zimmer To transfer or not to transfer - Complementing the eukaryotic protein-protein interactome |
Peschel, Christian | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Petretto, Enrico | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Petri, Tobias | RT-19 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine |
PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays | |
PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
Pett, J. Patrick | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Petzold, Andreas | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Pevzner, Pavel | PT-133 | Dmitry Ivankov, Stefano Bonissoni, Pavel Pevzner and Dmitrij Frishman Analysis of cleaved N-terminal sequences coming from MS/MS proteomics for E.coli and S.cerevisiae |
Pfeiffer, Andreas | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Pirkl, Nicole | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation | |
Placzek, Sandra | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
Platzer, Matthias | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Poczatek, Joseph C. | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
Posch, Stefan | HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference |
Prakash, Nilima | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
Preusse, Martin | JT-56 | Martin Preusse, Andreas Kowarsch, Carsten Marr and Fabian J. Theis miTALOS: Analyzing the tissue-specific regulation of signaling pathways by human and mouse microRNAs |
PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
Prohaska, Sonja J. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
Przemeck, Gerhard K. H. | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
Quester, Susanne | PT-92 | Susanne Quester and Dietmar Schomburg Enzyme Detector - integrated genomic enzyme function prediction |
Rarey, Matthias | JT-40 | Eva Vennmann, Nadine Schneider and Matthias Rarey Discrimination of permanent and transient heterodimers: The real challenge in the classification of protein-protein interactions |
Rasche, Florian | HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker Fragmentation trees from mass spectra: a step towards metabolite identification |
Rattei, Thomas | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
PT-111 | Harald Marx, Thomas Rattei, Simone Lemeer and Bernhard Kuster MScDB: A mass spectrometry centric protein sequence database | |
PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes | |
PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then | |
PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences | |
Rebollido-Rios, Rocio | PT-101 | Rocio Rebollido-Rios and Daniel Hoffmann The role of calcium ions for the stability of Sonic Hedgehog protein |
Reckow, Stefan | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
Reichwald, Kathrin | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Reinhardt, Sven | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Renard, Bernhard Y. | PT-123 | Martin S. Lindner and Bernhard Y. Renard Risks for Specificity and Sensitivity in Metagenomic Classification Experiments |
Renard, Bernhard | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
PT-121 | Franziska Zickmann and Bernhard Renard Influence of Target and Decoy Database Size on Peptide Identification Confidence | |
Rex, René | PT-114 | René Rex and Dietmar Schomburg Xeledon: Efficient enumeration of all steady state cycles in metabolic networks |
Richter, Andreas S. | RT-62 | Andreas S. Richter and Rolf Backofen Accessibility and conservation in bacterial small RNA-mRNA interactions and implications for genome-wide target predictions |
Richter, Stina-Stephanie M. | JT-10 | J. Patrick Pett, Daniel H. Mehnert, Jonas Ibn-Salem, Ole Eigenbrod, Raik Otto, Stephan Knorr, Stina-Stephanie M. Richter and Roland Krause Identification of shared components of protein complexes |
Ried, Christian | PT-99 | Christian Ried, Jan Kirrbach and Dieter Langosch Mapping the human single-span membrane proteome for self-interacting transmembrane domains |
Rist, Manuela | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Ristow, Michael | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
Rother, Michael | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
Sahin, Ugur | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection | |
Sahlin, Ullrika | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |
Schaefer, Benjamin | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
Schechter, Julia | PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain |
Scheer, Maurice | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
Schemarow, Ludmila | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
Schiemann, Matthias | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Schleiff, Enrico | PT-98 | Joachim Nöthen, Jörg Ackermann, Enrico Schleiff and Ina Koch Reduction techniques for validation of metabolic networks in Arabidopsis thaliana |
Schmidl, Daniel | JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
Schmidt, Thorsten | PT-77 | Nadine Albrecht, Hans-Werner Mewes and Thorsten Schmidt Regulatory action of lincRNAs on alternative transcript events |
Schmiedl, Christina | RT-47 | Mathias Möhl, Christina Schmiedl and Shay Zakov Sparsification in Algebraic Dynamic Programming |
Schmitt, Constanze | JT-48 | Matthias Böck, Constanze Schmitt and Stefan Kramer A Study of Dynamic Time Warping for the Inference of Gene Regulatory Relationships |
Schmitt, Wolfgang D | PT-135 | Jan Budczies, Frederick Klauschen, Wolfgang D Schmitt and Carsten Denkert CutoffFinder - Cutoff optimization for diagnostic variables and correlation with clinical outcome and survival data |
Schmitz, Alexander | PT-104 | Alexander Schmitz, Jörg Ackermann, Claudia Döring, Martin-Leo Hansmann and Ina Koch Image analysis of cancerous cells |
Schneeberger, Korbinian | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
Schneider, Nadine | JT-40 | Eva Vennmann, Nadine Schneider and Matthias Rarey Discrimination of permanent and transient heterodimers: The real challenge in the classification of protein-protein interactions |
Schneltzer, Elida | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
Scholtalbers, Jelle | PT-103 | Marius Byl, Thomas Bukur, Jelle Scholtalbers, Ludmila Schemarow, Martin Löwer, John Castle and Ugur Sahin TEA - TRON Expression Atlas: A Web-based Tool for Visualizing and Interpreting Next Generation Sequencing Expression Data |
Schomburg, Dietmar | PT-91 | Thomas Ulas and Dietmar Schomburg Genome-scale reconstruction and analysis of the metabolic network in the hyperthermophilic Archaeon Sulfolobus solfataricus |
PT-92 | Susanne Quester and Dietmar Schomburg Enzyme Detector - integrated genomic enzyme function prediction | |
PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models | |
PT-114 | René Rex and Dietmar Schomburg Xeledon: Efficient enumeration of all steady state cycles in metabolic networks | |
PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
Schomburg, Ida | PT-113 | Timo Lühr, Maurice Scheer, Melanie Busch, Michael Rother, Ida Schomburg and Dietmar Schomburg BRIME: A tool for visualization of metabolic models |
PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 | |
Schroeder, Timm | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
Schudoma, Christian | HT-28 | Christian Schudoma, Abdelhalim Larhlimi and Dirk Walther The influence of the local sequence environment on RNA loop structures |
Schulte-Wrede, Ursula | PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data |
Schultz, Joerg | PT-96 | Daniela Keller and Joerg Schultz Language dynamics revealed by morpheme networks |
Schulz, Daniel | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Schuster, Stefan | PT-78 | Martin Kötzing, Christoph Kaleta, Martin Bartl and Stefan Schuster Dynamic Optimization of Nitrogen Assimilation in Chlamydomonas reinhardtii |
PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans | |
PT-146 | Konrad Grützmann, Sebastian Böcker and Stefan Schuster Combinatorics of aliphatic amino acids | |
Schuster, Stephan | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
Schwalb, Björn | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Schwarz, Franziska | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Schwarzfischer, Michael | JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy |
Schäfer, Hendrik | PT-36 | Hendrik Schäfer and Ina Koch A pipeline to explore alternative splicing events |
Schäfer, Tim | PT-4 | Tim Schäfer, Patrick May and Ina Koch Extension of protein topologies by ligand interactions: computation and visualization |
Seizl, Martin | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
Selbig, Joachim | HT-18 | Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig and Zoran Nikoloski Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities |
PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose | |
Selzer, Paul M. | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
Senger, Christian | PT-127 | Xavier Lucas, Björn Andreas Grüning, Christian Senger and Stefan Günther Compound Library Preparation in Galaxy: Application to HT Docking |
Simon, Ronald | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
Skurk, Thomas | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Sommer, Michael | PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences |
Sotriffer, Christoph | PT-112 | Alexander Cecil, Santosh Nilla, Benjamin Schaefer, Christoph Sotriffer and Thomas Dandekar DrugPoint - a retrieval software and databank to connect proteins, drugs and targets. |
Spieler, David | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
Spranger, Joachim | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Stadermann, Kai | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
Stadler, Peter F. | PT-141 | Arli A. Parikesit, Peter F. Stadler and Sonja J. Prohaska Evolution of domain co-occurrences: some striking results |
Steinbiss, Sascha | PT-109 | Malte Mader, Ronald Simon, Sascha Steinbiss and Stefan Kurtz FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context |
Steinkamp, Ralph | PT-95 | Holger Maier, Christoph Lengger, Ralph Steinkamp, Anja Berger, Helmut Fuchs, Valérie Gailus-Durner and Martin Hrabé De Angelis MausDB: the phenotype- and mouse management system of the German Mouse Clinic |
Stoye, Jens | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
Strickert, Marc | HT-58 | Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert and Ivo Grosse De-Novo Discovery of Differentially Abundant DNA Binding Sites Including Their Positional Preference |
Ströhlein, Andreas | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
Stückler, Ferdinand | PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios |
Stümpflen, Volker | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
PT-85 | Daniel Ellwanger, Florian Büttner, Hans-Werner Mewes and Volker Stümpflen The sufficient minimal set of miRNA seed types | |
PT-131 | Jörg Bartel, Melanie Kahle, Jörn Leonhardt, Susanne Neschen and Volker Stümpflen A systems-biological perspective of non-alcoholic fatty liver disease in mice | |
Suhre, Karsten | HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data |
PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios | |
Sun, Mai | PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation |
Sushko, Iurii | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
Svatos, Ales | HT-15 | Florian Rasche, Ales Svatos, Ravi Kumar Maddula, Christoph Böttcher and Sebastian Böcker Fragmentation trees from mass spectra: a step towards metabolite identification |
Söhngen, Carola | PT-115 | Maurice Scheer, Antje Chang, Ida Schomburg, Andreas Grote, Michael Rother, Cornelia Munaretto, Carola Söhngen, Sandra Placzek and Dietmar Schomburg The BRENDA enzyme information resource in 2011 |
Sörensen, Till | PT-144 | Ulrike Haase, Marc Bonin, Stephan Flemming, Frank Buttgereit, Till Sörensen and Thomas Häupl A clinical database for networking in multicenter studies |
PT-145 | Till Sörensen, Ursula Schulte-Wrede, Andreas Grützkau and Thomas Häupl Automated and Standardized Clustering of Flow Cytometry Data | |
Taudien, Stefan | PT-122 | Philipp Koch, Bryan Downie, Andreas Petzold, Niels Jahn, Marco Groth, Stefan Taudien, Kathrin Reichwald and Matthias Platzer KILAPE: A novel pipeline for the assembly of complex genomes from next-generation sequencing data. |
Tavakkolkhah, Pegah | PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks |
Teetz, Wolfram | PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM |
Tetko, Igor | PT-117 | Sergii Novotarskyi, Iurii Sushko, Robert Körner and Igor Tetko Using docking-derived protein-ligand atom pair descriptors to increase performance of QSAR models for human CYP450 inhibition |
PT-118 | Iurii Sushko, Sergii Novotarskyi, Robert Körner and Igor Tetko Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of physicochemical and biological activities of small molecules | |
PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables | |
PT-142 | Ahmed Abdelaziz, Iurii Sushko, Wolfram Teetz, Robert Körner, Sergii Novotarskyi and Igor Tetko QSAR modeling for In vitro assays: linking ToxCast database to the integrated modeling framework OCHEM | |
Theis, Fabian J. | JT-38 | Sabine Hug, Daniel Schmidl, Wei Bo Li, Matthias Greiter and Fabian J. Theis Bayesian Model Selection for Zirconium Processing in the Human Body after Ingestion |
JT-43 | Michael Schwarzfischer, Carsten Marr, Jan Krumsiek, Philipp S. Hoppe, Adam Filipczyk, Timm Schroeder and Fabian J. Theis Automated cell quantication allows inference of protein half-life from single cell time-lapse microscopy | |
JT-56 | Martin Preusse, Andreas Kowarsch, Carsten Marr and Fabian J. Theis miTALOS: Analyzing the tissue-specific regulation of signaling pathways by human and mouse microRNAs | |
HT-22 | Jan Krumsiek, Karsten Suhre, Thomas Illig, Jerzy Adamski and Fabian J. Theis Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data | |
PT-45 | Ferdinand Stückler, Jan Krumsiek, Gabriele Kastenmüller, Susanne Krug, Manuela Rist, Thomas Skurk, Karsten Suhre, Hans Hauner, Hannelore Daniel and Fabian J. Theis Analysis of metabolic profiles using model-driven metabolite ratios | |
PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
Theißen, Günter | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
Thieme, Christoph J. | PT-84 | Christoph J. Thieme, Lydia Gramzow and Günter Theißen SplamiR - Predicting a new class of plant microRNAs |
Thomma, Anton | PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes |
Tiedemann, Hendrik B. | PT-83 | Hendrik B. Tiedemann, Elida Schneltzer, Bastian Hoesel, Johannes Beckers, Gerhard K. H. Przemeck and Martin Hrabé De Angelis From Dynamic Expression Patterns to Boundary Formation in the Presomitic Mesoderm |
Tiedemann, Ralph | PT-75 | Tina Meyer, Natascha Hill, Ralph Tiedemann and Stefanie Hartmann Computational Analysis of Mobile Elements in Intron-Sequences of Invertebrates |
Tran, Hon Q. | PT-80 | Andreas Ströhlein, Hon Q. Tran, Antje Krause and Paul M. Selzer Bacterial Pathogens and their Pan-Proteome - From Next-Generation Sequencing to Target Identification |
Tresch, Achim | JT-41 | Sebastian Dümcke, Martin Seizl, Nicole Pirkl, Steffanie Etzold, Dietmar Martin and Achim Tresch One Hand Clapping: Detection of condition-specic Transcription Factor Interactions from genome-wide gene activity Data |
PT-51 | Björn Schwalb, Mai Sun, Daniel Schulz, Nicole Pirkl, Laurent Lariviere, Kerstin Maier, Achim Tresch and Patrick Cramer Comparative Dynamic Transcriptome Analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation | |
Trümbach, Dietrich | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
Turaev, Dmitrij | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
PT-130 | Dmitrij Turaev, Michael Sommer and Thomas Rattei Evaluation And Comparison Of Different Taxonomic Classification Approaches Of Metagenomic Sequences | |
Turck, Chris W. | PT-100 | Philipp Gormanns, Stefan Reckow, Joseph C. Poczatek, Chris W. Turck and Claude Lechene Semi-automated image segmentation of Multi Isotope Imaging Mass Spectrometry data in the ImageJ plugin "OpenMIMS" |
Tuukkanen, Anne | PT-89 | Florian Heinke, Anne Tuukkanen and Dirk Labudde Analysis of membrane protein stability in nephrogenic diabetes insipidus by multiple energy profile alignment approach, MEPAL |
Tyanova, Stefka | PT-143 | Stefka Tyanova, Jürgen Cox, Dmitrij Frishman and Matthias Mann Effect of Phosphorylation on Ionization Efficiency during Mass-spectrometry Experiments |
Türeci, Özlem | PT-119 | Bernhard Renard, Martin Löwer, Jos De Graaf, Mustafa Diken, Özlem Türeci, Cedrik Britten, Sebastian Kreiter, Michael Koslowski, John Castle and Ugur Sahin Framework for confidence-based somatic mutation detection |
Ulas, Thomas | PT-91 | Thomas Ulas and Dietmar Schomburg Genome-scale reconstruction and analysis of the metabolic network in the hyperthermophilic Archaeon Sulfolobus solfataricus |
Velikkakam James, Geo | PT-124 | Vipul Patel, Geo Velikkakam James, Ales Pecinka and Korbinian Schneeberger Genotyping-by-sequencing of thousands of individuals |
Vennmann, Eva | JT-40 | Eva Vennmann, Nadine Schneider and Matthias Rarey Discrimination of permanent and transient heterodimers: The real challenge in the classification of protein-protein interactions |
Vilne, Baiba | PT-73 | Baiba Vilne, Monika Kröger, Rouzanna Istvanffy, Christina Eckl, Franziska Bock, Matthias Schiemann, Christian Peschel, Volker Stümpflen, Hans-Werner Mewes and Robert A.J. Oostendorp Regulatory networks of hematopoietic stem cells and their micro-environment |
Vingron, Martin | JT-64 | Alena Mysickova and Martin Vingron Detection of interacting transcription factors in human tissues using predicted DNA binding affinity |
HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes | |
Vogt-Weisenhorn, Daniela | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
Von Den Berken, Rainer | PT-33 | Rainer Von Den Berken and Markus Gumbel OODB4Genomics: An object-oriented database approach for biomedical data in clinical bioinformatics |
Von Haeseler, Arndt | JT-20 | Huy Dinh, Ortrun Mittelsten Scheid and Arndt Von Haeseler MethColor: a computational approach to uncover DNA methylation heterogeneity |
Vorberg, Susann | PT-82 | Susann Vorberg, Christian Buning and Ina Koch Sodium Dependent Glucose Transporter (SGLT) 1 / 2 - Elucidating Inhibitor SAR and Selectivity using Homology Modelling and 3D QSAR Studies |
Voß, Björn | RT-31 | Jiabin Huang and Björn Voß RNAHeliCes - Folding space analysis based on position aware structure abstraction |
Wallace, Chris | HT-66 | Matthias Heinig, Enrico Petretto, Chris Wallace, Anja Bauerfeind, Stefan Blankenberg, Martin Vingron, Norbert Hubner and Stuart Cook A conserved trans-acting regulatory locus underlies an inflammatory gene network and susceptibility to autoimmune type 1 diabetes |
Walther, Dirk | HT-28 | Christian Schudoma, Abdelhalim Larhlimi and Dirk Walther The influence of the local sequence environment on RNA loop structures |
Weber, Nico | PT-93 | Simon Domke, Suparna Mitra, Nico Weber, Stephan Schuster, Thomas Rattei and Daniel Huson MEGAN-DB - The MEtaGenome ANalyzer DataBase |
Weinmaier, Thomas | PT-129 | Thomas Weinmaier, Dmitrij Turaev, Yuliang Jin, Hernan Makse and Thomas Rattei Protein interaction networks - now and then |
Werner, Sarah | PT-88 | Christoph Kaleta, Luis Filipe De Figueiredo, Sarah Werner, Reinhard Guthke, Michael Ristow and Stefan Schuster In Silico Evidence for Gluconeogenesis From Fatty Acids in Humans |
Widder, Stefanie | PT-126 | Anton Thomma, Stefanie Widder and Thomas Rattei Age Classification of Genomic DNA from Metagenomes |
Wilhelm, Mathias | PT-108 | Nils Hoffmann, Mathias Wilhelm, Kai Stadermann and Jens Stoye Maui and Maltcms - A Graphical User Interface and Application Framework for High-Throughput Metabolomics |
Will, Sebastian | HT-35 | Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebastian Will and Michael Beckstette Structator: fast index-based search for RNA sequence-structure patterns |
Willmitzer, Lothar | PT-74 | Manuela Hische, Abdelhalim Larhlimi, Franziska Schwarz, Antje Fischer-Rosinsky, Thomas Bobbert, Anke Assmann, Gareth Catchpole, Andreas Pfeiffer, Lothar Willmitzer, Joachim Selbig and Joachim Spranger A distinct metabolic signature predicts development of fasting plasma glucose |
Willrodt, Dirk | PT-132 | Dirk Willrodt, Bernhard Haubold and Stefan Kurtz Memory efficient calculation of phylogenetic distances for whole genome sequences |
Windhager, Lukas | JT-54 | Lukas Windhager, Jonas Zierer and Ralf Zimmer Module Extraction from Ensembles of Networks |
Wolf, Verena | PT-105 | Mohammad Aminisharifabad, Verena Wolf and David Spieler Efficient Steady State Solution of Stochastic Systems Chemical Reactions |
Wurst, Wolfgang | PT-87 | Regina Augustin, Stefan F. Lichtenthaler, Kristina Endres, Sven Reinhardt, Peer-Hendrik Kuhn, Michael Greeff, Daniela Vogt-Weisenhorn, Jens Hansen, Wolfgang Wurst and Dietrich Trümbach Bioinformatics approach: Regulation of Alzheimer's disease-related genes by modules of TFBSs and microRNAs |
PT-97 | Michaela Matthes, Julia Schechter, Martin Preusse, Sebastian Götz, Bernd Lentes, Daniela Mayer, Fabian J. Theis, Wolfgang Wurst, Nilima Prakash and Dietrich Trümbach IDGenes: A reference database for dynamic modelling of genetic interactions in the developing mouse brain | |
Zacharias, Martin | PT-120 | Mahmut Kara and Martin Zacharias Comparison of the fine structure and dynamics of damaged and intact DNA |
Zakov, Shay | RT-47 | Mathias Möhl, Christina Schmiedl and Shay Zakov Sparsification in Algebraic Dynamic Programming |
Zickmann, Franziska | PT-121 | Franziska Zickmann and Bernhard Renard Influence of Target and Decoy Database Size on Peptide Identification Confidence |
Zierer, Jonas | JT-54 | Lukas Windhager, Jonas Zierer and Ralf Zimmer Module Extraction from Ensembles of Networks |
Zimmer, Ralf | JT-27 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests |
JT-49 | Florian Erhard and Ralf Zimmer Detecting outlier peptides in quantitative High-Troughput mass spectrometry | |
JT-50 | Robert Pesch and Ralf Zimmer To transfer or not to transfer - Complementing the eukaryotic protein-protein interactome | |
JT-54 | Lukas Windhager, Jonas Zierer and Ralf Zimmer Module Extraction from Ensembles of Networks | |
RT-19 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
RT-44 | Orland Gonzalez, Georg Malterer, Ralf Zimmer and Jürgen Haas Guilt by Association in Human RNAi Screens | |
HT-21 | Caroline C. Friedel, Lars Dölken and Ralf Zimmer High resolution profiling of RNA synthesis and decay | |
PT-17 | Tobias Petri, Evi Berchtold, Ralf Zimmer and Caroline C. Friedel Detection and correction of probe-level measurement artefacts on microarrays | |
PT-94 | Thomas Bonfert, Gergely Csaba, Ralf Zimmer and Caroline C. Friedel Maximizing the number of aligned reads from RNA-Seq data | |
PT-116 | Martin Macguill, Tobias Petri and Ralf Zimmer On Risk Stratification Strategies in Intensive Care Medicine | |
PT-137 | Haroon Naeem, Ralf Zimmer and Robert Küffner Rigorous assessment of gene set enrichment tests | |
PT-138 | Stefan Altmann, Ralf Zimmer and Robert Küffner Network Inference in Eukaryotes | |
PT-140 | Pegah Tavakkolkhah, Ralf Zimmer and Robert Küffner Time-sensitive inference of gene regulatory networks | |
Öberg, Tomas | PT-136 | Stefan Brandmaier, Ullrika Sahlin, Tomas Öberg and Igor Tetko Stepwise D-Optimal design based on latent variables |